Package: tidyvpc 1.5.2

James Craig

tidyvpc: VPC Percentiles and Prediction Intervals

Perform a Visual Predictive Check (VPC), while accounting for stratification, censoring, and prediction correction. Using piping from 'magrittr', the intuitive syntax gives users a flexible and powerful method to generate VPCs using both traditional binning and a new binless approach Jamsen et al. (2018) <doi:10.1002/psp4.12319> with Additive Quantile Regression (AQR) and Locally Estimated Scatterplot Smoothing (LOESS) prediction correction.

Authors:Olivier Barriere [aut], Benjamin Rich [aut], James Craig [aut, cre], Samer Mouksassi [aut], Bill Denney [ctb], Michael Tomashevskiy [ctb], Kris Jamsen [ctb], Certara USA, Inc. [cph, fnd]

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tidyvpc.pdf |tidyvpc.html
tidyvpc/json (API)
NEWS

# Install 'tidyvpc' in R:
install.packages('tidyvpc', repos = c('https://certara.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/certara/tidyvpc/issues

Datasets:
  • obs_cat_data - Example observed data with categorical DV
  • obs_data - Example observed data with continuous DV
  • sim_cat_data - Example simulated data with categorical DV
  • sim_data - Example simulated data with continuous DV

On CRAN:

8.01 score 11 stars 1 packages 49 scripts 923 downloads 18 exports 44 dependencies

Last updated 6 hours agofrom:c0acd97c9d. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 21 2024
R-4.5-winOKNov 21 2024
R-4.5-linuxOKNov 21 2024
R-4.4-winOKNov 21 2024
R-4.4-macOKNov 21 2024
R-4.3-winOKNov 21 2024
R-4.3-macOKNov 21 2024

Exports:bin_by_classIntbin_by_eqcutbin_by_ntilebin_by_pambininfobinlessbinningcensoringcheck_ordercut_atnearestnopredcorrectnpdeobservedpredcorrectsimulatedstratifyvpcstats

Dependencies:classclassIntcliclustercolorspacedata.tablee1071eggfansifarverfastDummiesggplot2gluegridExtragtableisobandKernSmoothlabelinglatticelifecyclemagrittrMASSMatrixMatrixModelsmgcvmunsellnlmepillarpkgconfigproxyquantregR6RColorBrewerrlangscalesSparseMstringistringrsurvivaltibbleutf8vctrsviridisLitewithr

Introduction to categorical VPC

Rendered fromtidyvpc_cat.pdf.asisusingR.rsp::asison Nov 21 2024.

Last update: 2024-11-21
Started: 2024-11-21

Introduction to continuous VPC

Rendered fromtidyvpc_cont.pdf.asisusingR.rsp::asison Nov 21 2024.

Last update: 2024-11-21
Started: 2024-11-21

tidyvpc with nlmixr2

Rendered fromtidyvpc_nlmixr2.pdf.asisusingR.rsp::asison Nov 21 2024.

Last update: 2024-11-21
Started: 2024-11-21